2015年上海科技大學iHuman研究所趙素文研究組招聘博士后1名啟事

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    上??萍即髮WiHuman研究所是隸屬于上??萍即髮W的一個國際化的高水平研究機構。iHuman研究所坐落于上海浦東新區(qū)張江高科技園區(qū),于2012年11月20日揭牌正式成立。iHuman 研究所是由一批包括諾貝爾獎得主在內(nèi)的國際知名學者按照頂級研究所標準建設而成。研究所聚焦與人類重大疾病相關的G蛋白偶聯(lián)受體(GPCR)和與之相關的人體細胞信號轉導的重要生物學問題和藥物發(fā)現(xiàn)研究,通過與國際知名學術研究機構和大型藥物研發(fā)企業(yè)結成緊密的戰(zhàn)略聯(lián)盟,開展產(chǎn)學研一體化的高水平研究。
    上??萍即髮WiHuman研究所趙素文研究組使用計算生物學的方法,與iHuman各實驗研究組密切合作,致力于研究以下課題:1.生物大分子結構模擬:GPCR、人體細胞信號通路中的蛋白質(zhì)復合體的結構模擬;2.配體發(fā)現(xiàn):GPCR配體預測、GPCR藥物設計方法的開發(fā)和應用?,F(xiàn)誠招博士后1名。
    一、招聘條件
    1)計算生物學或計算化學背景相關專業(yè)博士畢業(yè);優(yōu)先考慮在國際刊物上以第一作者或通訊作者發(fā)表過論文的申請者;
    2)理解物理化學、統(tǒng)計熱力學原理;
    3)有蛋白質(zhì)分子模擬/分子對接/分子動力學模擬經(jīng)驗者優(yōu)先考慮;
    4)熟悉Linux操作,至少熟練使用一種腳本語言(Perl,Python等);
    5)具備極強的獨立科研能力、進取心和優(yōu)良的團隊精神;
    6)具有良好的英語讀寫和交流能力。
    二、工作條件與工資待遇
    按照上??萍即髮W相應崗位的相關規(guī)定執(zhí)行,根據(jù)個人具體情況,提供具有競爭力的薪酬、津貼和福利。本實驗室會非常重視科研人員的職業(yè)發(fā)展,會提供各種科學培訓和參加學術會議活動的機會。
    三、申請方式
    1)詳細的個人中英文簡歷:包括學習工作經(jīng)歷、主要研究工作內(nèi)容、代表論文論著、獲獎情況。
    2)三封推薦信。
    3)所有材料用電子版發(fā)至iHuman@shanghaitech.edu.cn , 抄送至zhaosw@shanghaitech.edu.cn , 郵件標題請注明:申請博士后-趙素文課題組-申請人姓名。
    欲了解趙素文博士過去的研究工作,請參看:
    [1] S. Zhao, R. Kumar, A. Sakai, M. W. Vetting, B. M. Wood, S. Brown, J. B. Bonanno, B. S. Hillerich, R. D. Seidel, P. C. Babbitt, S. C. Almo, J. V. Sweedler, J. A. Gerlt, J. E. Cronan, and M. P. Jacobson, “Discovery of new enzymes and metabolic pathways by using structure and genome context”, Nature, 502, 698-702 (2013)
    [2] S. Zhao, A. Sakai, X. Zhang, M. W. Vetting, R. Kumar, B. Hillerich, B. San Francisco, J. Solbiati, A. Steves, S. Brown, E. Akiva, A. Barber, R. D. Seidel, P. C. Babbitt, S. C. Almo, J. A. Gerlt and M. P. Jacobson, “Prediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networks”, eLife, e03275 (2014)
    [3] M. P. Jacobson, C. Kalyanaraman, S. Zhao and B. Tian, “Leveraging structure for enzyme function prediction: methods, opportunities, and challenges”, Trends Biochem. Sci. 39 (8), 363-371 (2014)
    [4] R. Kumar, S. Zhao, A. Sakai, M. W. Vetting, B. M. Wood, S. C. Almo, J. V. Sweedler, J. A. Gerlt, J. E. Cronan, and M. P. Jacobson, “Prediction and biochemical demonstration of a catabolic pathway for the osmoprotectant, proline betaine”, mBio, 5, (2014).
    [5] B. Tian, F. Wallrapp, C. Kalyanaraman, S. Zhao, L. A. Eriksson, M. P. Jacobson, “Exploring enzyme substrate specificity with docking and QM/MM methods: A benchmarking study on the stereo-specificity of D-glucarate dehydratase”, Biochemistry, 52, 5511-5513 (2013).
    [6] E. B. Miller, C. S. Murrett, K. Zhu, S. Zhao, D. A. Goldfeld, J. H. Bylund, and R. A. Friesner, “Prediction of long loops with embedded secondary structure using the Protein Local Optimization Program”, J. Chem. Theory Comput., 9, 1846-1864 (2013).
    [7] S. Zhao, K. Zhu, J. Li, R. A. Friesner, “Progress in super long loop prediction”, Proteins, 79, 2920-2935 (2011).
    [8] J. Li, R. Abel, K. Zhu, Y. Cao, S. Zhao, R. A. Friesner, “The VSGB 2.0 model: A next generation energy model for high resolution protein structure modeling”, Proteins, 79, 2794-2812 (2011).
    [9] B. Sellers, K. Zhu, S. Zhao, R. A. Friesner, M. P. Jacobson, “Towards better refinement of comparative models: Predicting loops in inexact environments”, Proteins, 72, 959-971 (2008).
    [10] K. Zhu, D. L. Pincus, S. Zhao, R. A. Friesner, “Long loop prediction using the Protein Local Optimization Program”, Proteins, 65, 438-452 (2006).
    [11] X. Li, M. P. Jacobson, K. Zhu, S. Zhao, R. A. Friesner, “Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling”, Proteins, 66 , 824-837 (2006).
    [12] S. Zhao, L. Liu, Y. Fu, Q. Guo, “Assessment of the metabolic stability of the methyl groups in heterocyclic compounds using C-H bond dissociation energies: Effects of diverse aromatic groups on the stability of methyl radicals”, J. Phys. Org. Chem., 18, 353-367 (2005).
    [13] Y. Feng, S. Zhao, L. Liu, J. Wang, X. Li, Q. Guo, “Blue-shifted dihydrogen bonds”, J. Phys. Org. Chem., 17, 1099-1106 (2004).
    [14] Y. Feng, L. Liu, S. Zhao, J. Wang, Q. Guo, “Origin of conformational restriction in complexes of formyl compounds with boron Lewis acids and their related systems”, J. Phys. Chem. A, 108, 9196–9204 (2004).
    [15] Y. Feng, L. Liu, J. Wang, S. Zhao, Q. Guo, “Homolytic C-H and N-H bond dissociation energies of strained organic compounds”, Journal of Organic Chemistry, 69, 3129-3138 (2004).